miRBooking-scan explore miRBooking 2.0 predictions

The miRBooking-scan Web service provides an exploratory view of reference microtargetomes computed by miRBooking 2.0.

Cell lines

The following entries are cell line microtargetomes:

A549
Adenocarcinomic human alveolar basal epithelial cells.
K562
Erythroleukemia cell line derived from a derived from a 53-year-old female chronic myelogenous leukemia patient in blast crisis.
MCF-7
Breast cancer cell line isolated in 1970 from a 69-year-old Caucasian woman.
HeLa-S3
Immortalized human cell line derived from cervical cancer cells.
HepG2
Hepatocellular carcinoma.
GM12878
ENCSR447YYN
H1-hESC
H1 human embryonic stem cell line.
GM23248
These are primary fibroblasts taken from the PGP1 donor from the Personal Genome Project (PGP).
GM23338
These are induced pluripotent stem cells (iPSC) created from the PGP1 donor from the Personal Genome Project (PGP).
BJ
OCI-LY7
Established from the peripheral blood sample of a 48-year-old man with B-cell Non-Hodgkin lymphoma (B-NHL, diffuse large cell lymphoma, DLCL, stage 2A, at relapse) in 1984.
Karpas-422
Karpas422- Human B cell non-Hodgkin lymphoma.
AG04450
Lung fibroblast
H1-hESC (2)
H1 human embryonic stem cell line.
Thyroid gland
Thyroid gland (37 year old male)
Gastrocnemius medialis
Human gastrocnemius medialis (37 year old male)
Adrenal gland
Human adrenal gland (37 year old male)
Uterus
Human uterus (51 year old female).
Liver (right lobe)
Human right lobe of liver (53 year old female).
Heart (left ventricule)
Human heart left ventricle (53 year old female).
Vagina
Human vagina (53 year old female).
Gastrocnemius medialis
Human gastrocnemius medialis (54 year old male).
Thyroid gland
Human thyroid gland (54 year old male).
Adrenal gland
Human adrenal gland (54 year old male).

Cite us

miRBooking 1.0: Weill N, Lisi V, Scott N, Dallaire P, Pelloux J, Major F. MirBooking simulates the stoichiometric mode of action of microRNAs, Nucleic Acids Res. 2015 43(14):6730-8.

miRBooking 2.0: Publication upcoming!