MC-Fold :: seq -> [2D] (not available Mac)


    To install and run MC-Fold on your computer:

        1) Download the archive mcfold.tar.gz (version Mar 17 2008 17:48:11)

        2) Get instructions from the readme.txt file.

        3) Download the archive MC-Flashfold-v34.zip (version 34 May 2015)

        4) Download the archive MC-Flashfold-v37.zip (version 37 2018)


MC-Sym :: 2D -> [3D]


    Linux


    To install and run MC-Sym on your computer:

      1) Download the program MC-Sym-4.2.2.zip (version 4.2.2)

      2) Download the database mcsymdb-4.2.1.bin.gz

      3) Define the environment variable MCSYM_DB:

              ex) setenv MCSYM_DB /soft/share/mcsym/db/mcsymdb-4.2.1.bin.gz

                    where /soft/share/mcsym/db is the directory where

                               mcsymdb-4.2.1.bin.gz is located.

      4) Make sure the directory that contains the mcsym executable is defined

          in your path.


    Mac OS X 10.5


      1) Download the program MC-Sym-4.1.3.zip (version 4.1.3)

      2) Download the database mcsymdb-4.2.1.bin.gz

      3) Define the environment variable MCSYM_DB:

              ex) setenv MCSYM_DB /soft/share/mcsym/db/mcsymdb-4.2.1.bin.gz

                    where /soft/share/mcsym/db is the directory where

                               mcsymdb-4.2.1.bin.gz is located.

      4) Make sure the directory that contains the mcsym executable is defined

          in your path.


MC-Cons :: [(seq, [2D])] -> [(seq, 2D)] (not available for download)


    Not available for download yet.

    Use the Web service in the meantime.


MC-Search :: graph -> [3D] -> [3D]


    No Web service available yet.


   Linux


    To install and run MC-Search on your Linux computer:

      download the program mcsearch.zip (version 0.5)


   Mac OS X 10.5


   To install andrun MC-Search on your Mac

     download the program mcsearch.zip (version 0.5)


MC-Seq :: graph | 3D -> [seq] (not available)


   No Web service available yet.

   Not available for download yet.


MC-Annotate :: 3D -> graph


   No Web service yet.


   Linux (requires the MC-Core library - see below)


    To install and run MC-Annotate on your Linux computer:

      download the program MC-Annotate.zip (version1.6.2)


   Mac OS X 10.5


    To install and run MC-Annotate on your Mac:

      download the program MC-Annotate.zip  (version 1.5)


MC-RMSD :: [3D] -> [num]


   No Web service.


   Linux (requires the MC-Core library - see below)


    To install and run MC-RMSD on your Linux computer:

      download the program MC-RMSD-4.3.4 (version 4.3.4)


MC-Core library


  Linux


    To install the MC-Core library under linux:

      download the library libmccore.dylib.1.6.2

RNA Engineering

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